Phylogenetic Analysis of Lisaea Boiss. (Apiaceae) Species in Türkiye Based on Chloroplast DNA (cpDNA) trnL-intron, trnL-F, matK and rbcL Sequences

MakaleYalnız künyeScopus SJRQ3

Özet

Abstract: In this study, Lisaea heterocarpa,Lisaea papyracea and Lisaea strigosa species belonging to the Lisaea genus distributed in Türkiye phylogenetic analysis was determined chloroplast DNA regions. Plant samples were collected from different provinces of Türkiye and taken to the laboratory for genomic DNA isolation, polymerase chain reaction and bioinformatics analysis. As a result of the study, the lowest π-nucleotide diversity was found in the rbcL analyses (0.000917), while the highest π-nucleotide diversity was found in the trnL-F analysis (0.008700). In the phylogenetic trees constructed using trnL intron, trnL-F,and rbcL sequences, the species L. strigosa and L. papyracea appeared together, while L. heterocarpa appeared close to this group. The matK sequences, L. strigosa and L.heterocarpa appeared together, while L. papyracea appeared close to this group. In addition, the phylogenetic trees constructed using sequences from some Apiaceae species from National Center for Biotechnology Information (NCBI) determined that the genus Lisaea is monophyletic. In the trnL-F and rbcL analyses, Lisaea species appeared together with Torilis,Yabea, Daucus, Cuminum, Pternopetalum and Anthriscus species, while in the matK analysis, Lisaea species appeared in a different group from Anthriscus species.

Anahtar Kelimeler

RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/munzur/1282Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.1134/s1062359025600412Yayıncı resmi DOI adresi
İndeks kayıtları
Kaydın indeks veri tabanlarındaki sayfası (aktarımda alınan kayıt numarasıyla). Erişim, indeksin kendi koşullarına bağlıdır.
Atıflar
Scopus
1
WoS
1
OpenAlex
1
Her kaynağın kendi saydığı toplam atıf; aktarım ve zenginleştirme sırasında alındı.
Tam Kayıt
AlanDeğerDil
dc.contributor.authorEfe, Fadime
dc.contributor.authorSevindik, Emre
dc.contributor.authorSevindik, Mustafa
dc.contributor.authorPaksoy, Mehmet Yavuz
dc.date.accessioned2026-10-28T14:54:03.530374570Z
dc.date.available2026-10-28T14:54:03.530374570Z
dc.date.issued2025
dc.description.abstractAbstract: In this study, Lisaea heterocarpa,Lisaea papyracea and Lisaea strigosa species belonging to the Lisaea genus distributed in Türkiye phylogenetic analysis was determined chloroplast DNA regions. Plant samples were collected from different provinces of Türkiye and taken to the laboratory for genomic DNA isolation, polymerase chain reaction and bioinformatics analysis. As a result of the study, the lowest π-nucleotide diversity was found in the rbcL analyses (0.000917), while the highest π-nucleotide diversity was found in the trnL-F analysis (0.008700). In the phylogenetic trees constructed using trnL intron, trnL-F,and rbcL sequences, the species L. strigosa and L. papyracea appeared together, while L. heterocarpa appeared close to this group. The matK sequences, L. strigosa and L.heterocarpa appeared together, while L. papyracea appeared close to this group. In addition, the phylogenetic trees constructed using sequences from some Apiaceae species from National Center for Biotechnology Information (NCBI) determined that the genus Lisaea is monophyletic. In the trnL-F and rbcL analyses, Lisaea species appeared together with Torilis,Yabea, Daucus, Cuminum, Pternopetalum and Anthriscus species, while in the matK analysis, Lisaea species appeared in a different group from Anthriscus species.
dc.description.sponsorshipAdnan Menderes Üniversitesi, (ZRF21008)
dc.description.sponsorshipAdnan Menderes Üniversitesi
dc.identifier.articlenumber199
dc.identifier.doi10.1134/s1062359025600412
dc.identifier.eissn1608-3059
dc.identifier.issn1062-3590
dc.identifier.issue5
dc.identifier.scopus2-s2.0-105015088463
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/munzur/1282
dc.identifier.volume52
dc.identifier.wosWOS:001567067500004
dc.language.isoen
dc.publisherPleiades Publishing
dc.relation.ispartofBiology Bulletin
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectcpDNA
dc.subjectLisaea
dc.subjectphylogenetic analysis
dc.subjectTürkiye
dc.subject.classificationBiology
dc.subject.classificationLife Sciences & Biomedicine - Other Topics
dc.subject.otherNUCLEAR RIBOSOMAL DNA
dc.subject.otherMOLECULAR PHYLOGENY
dc.subject.otherSUBFAMILY APIOIDEAE
dc.subject.otherFAMILY
dc.subject.otherCAUCALIDEAE
dc.subject.otherPRIMERS
dc.subject.otherTAXA
dc.titlePhylogenetic Analysis of Lisaea Boiss. (Apiaceae) Species in Türkiye Based on Chloroplast DNA (cpDNA) trnL-intron, trnL-F, matK and rbcL Sequences
dc.typeArticle
rdl.citation.openalex1
rdl.citation.scopus1
rdl.citation.wos1
rdl.oa.statusclosed
rdl.scopus.quartileQ3
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)