MOLECULAR CHARACTERIZATION OF Dittrichia viscosa (L.) GREUTER (ASTERACEAE) POPULATIONS REVEALED BY ISSR MARKERS AND CHLOROPLAST (cpDNA) trnL INTRON SEQUENCES; [MOLEKULARNA KARAKTERIZACIJA POPULACIJA Dittrichia viscosa (L.) GREUTER (ASTERACEAE) POMOĆU ISSR MARKERA I HLOROPLAST (cpDNA) trnL INTRONSKIH SEKVENCI]

MakaleYalnız künyeScopus SJRQ3

Özet

In this study, molecular characterization of Dittrichia viscosa (L.) Greuter populations collected from Aydın province was carried out based on ISSR technique and chloroplast DNA trnL intron sequences. 10 ISSR primers were used to determine the molecular characterization among the populations. For cpDNA trnL intron amplification, trnC and trnD primers were used. In ISSR analysis, a total of 70 bands were obtained. The polymorphism rate was determined to be approximately 94.28%. According to the ISSR analysis, the UPGMA dendrogram consisted of three groups. For cpDNA trnL intron sequences, phylogenetic analyses were obtained along with genetic distances. For populations, cpDNA trnL intron sequences were determined between 454 and 472 bases. The maximum likelihood phylogenetic tree consist of two clades. In addition, cpDNA trnL intron sequences of some species (Chrysophthalmum Pulicaria Inula Jasonia Stenachaenium Carpesium Blumea Iphiona Limbarda Rhanterium Lifago Duhaldea Chiliadenus) of Asteraceae family from NCBI with Dittrichia viscosa populations phylogenetic tree was constructed. As a result of the study, it was determined that the polymorphism rate of Dittrichia viscosa populations obtained by ISSR-PCR was higher than the results obtained from trnL intron sequences.

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RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/munzur/2467Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.2298/gensr23010217sYayıncı resmi DOI adresi
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3
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4
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Tam Kayıt
AlanDeğerDil
dc.contributor.authorSevindik, Emre
dc.contributor.authorBozkurt, Makbule
dc.contributor.authorYilmaz, Mehmet
dc.contributor.authorŞenyüz, Ezginur
dc.contributor.authorPaksoy, Mehmet Yavuz
dc.date.accessioned2026-10-28T14:55:24.813910822Z
dc.date.available2026-10-28T14:55:24.813910822Z
dc.date.issued2023
dc.description.abstractIn this study, molecular characterization of Dittrichia viscosa (L.) Greuter populations collected from Aydın province was carried out based on ISSR technique and chloroplast DNA trnL intron sequences. 10 ISSR primers were used to determine the molecular characterization among the populations. For cpDNA trnL intron amplification, trnC and trnD primers were used. In ISSR analysis, a total of 70 bands were obtained. The polymorphism rate was determined to be approximately 94.28%. According to the ISSR analysis, the UPGMA dendrogram consisted of three groups. For cpDNA trnL intron sequences, phylogenetic analyses were obtained along with genetic distances. For populations, cpDNA trnL intron sequences were determined between 454 and 472 bases. The maximum likelihood phylogenetic tree consist of two clades. In addition, cpDNA trnL intron sequences of some species (Chrysophthalmum Pulicaria Inula Jasonia Stenachaenium Carpesium Blumea Iphiona Limbarda Rhanterium Lifago Duhaldea Chiliadenus) of Asteraceae family from NCBI with Dittrichia viscosa populations phylogenetic tree was constructed. As a result of the study, it was determined that the polymorphism rate of Dittrichia viscosa populations obtained by ISSR-PCR was higher than the results obtained from trnL intron sequences.
dc.description.sponsorshipTUBITAK 2018/2209-A, (1919B011803513)
dc.description.sponsorshipTUBITAK 2020/2209-A, (1919B012001293)
dc.identifier.doi10.2298/gensr23010217s
dc.identifier.eissn1820-6069
dc.identifier.endpage228
dc.identifier.issn0534-0012
dc.identifier.issue1
dc.identifier.scopus2-s2.0-85160415233
dc.identifier.startpage217
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/munzur/2467
dc.identifier.volume55
dc.identifier.wosWOS:001003651400017
dc.language.isoen
dc.publisherSerbian Genetics Society
dc.relation.ispartofGenetika
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectcpDNA trnL intron
dc.subjectDittrichia viscosa
dc.subjectISSR-PCR
dc.subjectmolecular
dc.subject.classificationAgronomy
dc.subject.classificationGenetics & Heredity
dc.subject.classificationAgriculture
dc.subject.otherPHYLOGENETIC-RELATIONSHIPS
dc.subject.otherGENETIC DIVERSITY
dc.subject.otherESSENTIAL OIL
dc.subject.otherINULEAE
dc.subject.otherPLANT
dc.subject.otherDNA
dc.subject.otherANTIOXIDANT
dc.subject.otherREGIONS
dc.subject.otherRAPD
dc.titleMOLECULAR CHARACTERIZATION OF Dittrichia viscosa (L.) GREUTER (ASTERACEAE) POPULATIONS REVEALED BY ISSR MARKERS AND CHLOROPLAST (cpDNA) trnL INTRON SEQUENCES; [MOLEKULARNA KARAKTERIZACIJA POPULACIJA Dittrichia viscosa (L.) GREUTER (ASTERACEAE) POMOĆU ISSR MARKERA I HLOROPLAST (cpDNA) trnL INTRONSKIH SEKVENCI]
dc.typeArticle
rdl.citation.scopus3
rdl.citation.wos4
rdl.oa.statusclosed
rdl.scopus.quartileQ3
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)