PHYLOGENETIC ANALYSIS OF WILD GROWS GANODERMA LUCIDUM IN TURKEY BASED ON THE ITS REGION OF RDNA AND OBTAINING HYBRID STRAINS BY PROTOPLAST FUSION METHOD

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Özet

Ganoderma is a cosmopolitan genus of fungi in many tree species. In this study, two wild Ganoderma lucidum strains that show the natural distribution in oak trees in the Mediterranean region (Alata and Balcali) were collected and their phylogenetic relationships based on the internal transcribed spacer rDNA region were defined and investigated. 3 equal phylogenetic trees were obtained using ITS sequences, the smallest of which was similar to 517 bp and the largest was similar to 836 bp, and the analysis of Maximum Likelihood (Kimura 2 and Tamura 3) and Maximum Parsimony (Bootstrap: 1000). G. lucidum strain in Turkey, unlike its European and Chinese relatives along with high bootstrap values (ML-K2P: 99%, ML-T2: 98%, and MP: 98%) they form a cluster with G. resinaceum. Moreover, results of phylogenetic analysis observing over 70% bootstrap (ML-K2P = 80%, ML-T3 = 79% and MP 86%) values of the G. lucidum samples in the study even among themselves creates an impression that these two strains arc a sub-strain of a new G. lucidum. RAPD method was used for molecular identification of hybrids acquired by protoplast regeneration. The difference between hybrid individuals was best identified as a result of RAPD analysis performed with primer no RAPD-GN X-17.

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dc.contributor.authorKar, Bulent
dc.date.accessioned2026-10-28T15:03:40.290321887Z
dc.date.available2026-10-28T15:03:40.290321887Z
dc.date.issued2021
dc.description.abstractGanoderma is a cosmopolitan genus of fungi in many tree species. In this study, two wild Ganoderma lucidum strains that show the natural distribution in oak trees in the Mediterranean region (Alata and Balcali) were collected and their phylogenetic relationships based on the internal transcribed spacer rDNA region were defined and investigated. 3 equal phylogenetic trees were obtained using ITS sequences, the smallest of which was similar to 517 bp and the largest was similar to 836 bp, and the analysis of Maximum Likelihood (Kimura 2 and Tamura 3) and Maximum Parsimony (Bootstrap: 1000). G. lucidum strain in Turkey, unlike its European and Chinese relatives along with high bootstrap values (ML-K2P: 99%, ML-T2: 98%, and MP: 98%) they form a cluster with G. resinaceum. Moreover, results of phylogenetic analysis observing over 70% bootstrap (ML-K2P = 80%, ML-T3 = 79% and MP 86%) values of the G. lucidum samples in the study even among themselves creates an impression that these two strains arc a sub-strain of a new G. lucidum. RAPD method was used for molecular identification of hybrids acquired by protoplast regeneration. The difference between hybrid individuals was best identified as a result of RAPD analysis performed with primer no RAPD-GN X-17.
dc.identifier.eissn1610-2304
dc.identifier.endpage3909
dc.identifier.issn1018-4619
dc.identifier.issue4
dc.identifier.startpage3895
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/munzur/4729
dc.identifier.volume30
dc.identifier.wosWOS:000658171700090
dc.language.isoen
dc.publisherParlar Research & Technology UG
dc.relation.ispartofFRESENIUS ENVIRONMENTAL BULLETIN
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectGanodermataceae
dc.subjectmolecular phylogeny
dc.subjectInternal transcribed spacer (ITS)
dc.subjectprotoplast fusion and RAPD
dc.subject.classificationEnvironmental Sciences
dc.subject.classificationEnvironmental Sciences & Ecology
dc.subject.otherOIL PALM
dc.subject.otherCOMPLEX
dc.subject.otherDNA
dc.subject.otherIDENTIFICATION
dc.subject.otherPOLYSACCHARIDE
dc.subject.otherDIVERSITY
dc.subject.otherPCR
dc.subject.otherBASIDIOMYCOTA
dc.subject.otherANTIOXIDANT
dc.subject.otherMORPHOLOGY
dc.titlePHYLOGENETIC ANALYSIS OF WILD GROWS GANODERMA LUCIDUM IN TURKEY BASED ON THE ITS REGION OF RDNA AND OBTAINING HYBRID STRAINS BY PROTOPLAST FUSION METHOD
dc.typeArticle
rdl.citation.wos0
rdl.oa.statusclosed
rdl.source.indexWOS
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)